๐Ÿง  Parcellation vs Segmentation — ์ •ํ™•ํ•œ ์ฐจ์ด

 

๐Ÿง  Parcellation vs Segmentation — ์ •ํ™•ํ•œ ์ฐจ์ด

ํ•ต์‹ฌ ์š”์•ฝ๋ถ€ํ„ฐ:

Segmentation์€ “๋ฌด์—‡์ธ๊ฐ€”๋ฅผ ๋‚˜๋ˆ„๋Š” ๊ฒƒ์ด๊ณ ,
Parcellation์€ “์–ด๋””์ธ๊ฐ€”๋ฅผ ๋‚˜๋ˆ„๋Š” ๊ฒƒ์ด๋‹ค.

์กฐ๊ธˆ ๋” ํ•™์ˆ ์ ์œผ๋กœ ์ •๋ฆฌํ•ด ๋ณด๊ฒ ์Šต๋‹ˆ๋‹ค.


1️⃣ Segmentation (๋ถ„ํ• )

์ •์˜

Segmentation์€:

์˜์ƒ์—์„œ ํŠน์ • ์กฐ์ง์ด๋‚˜ ๊ตฌ์กฐ๋ฅผ ๋ถ„๋ฆฌ(extract) ํ•˜๋Š” ์ž‘์—…

์ž…๋‹ˆ๋‹ค.


์งˆ๋ฌธ์˜ ์ดˆ์ 

๐Ÿ‘‰ ์ด ํ”ฝ์…€์ด ๋‡Œ์ธ๊ฐ€? ๋ฐฐ๊ฒฝ์ธ๊ฐ€? ํšŒ๋ฐฑ์งˆ์ธ๊ฐ€?


ํŠน์ง•

  • Binary ๋˜๋Š” multi-label ๊ฐ€๋Šฅ

  • ๊ฒฝ๊ณ„ ๊ธฐ๋ฐ˜

  • ํ˜•ํƒœ ์ค‘์‹ฌ

  • ๊ตฌ์กฐ ์ถ”์ถœ ๋ชฉ์ 


์˜ˆ์‹œ

์˜ˆ์˜๋ฏธ
Brain vs Background๋‡Œ๋งŒ ๋ถ„๋ฆฌ
Gray / White / CSF์กฐ์ง ๋ถ„ํ• 
Tumor Segmentation๋ณ‘๋ณ€ ๋ถ„๋ฆฌ
Organ Segmentation์žฅ๊ธฐ ์ถ”์ถœ

๊ฒฐ๊ณผ

๋ณดํ†ต:

mask labelmap segmentation

ํ˜•ํƒœ.


PET ํŒŒ์ดํ”„๋ผ์ธ์—์„œ์˜ ์—ญํ• 

๐Ÿ‘‰ PET SUV๋ฅผ ๊ณ„์‚ฐํ•˜๊ธฐ ์œ„ํ•œ ROI ๋งˆ์Šคํฌ

์ฆ‰:

์—ฌ๊ธฐ์— PET ๊ฐ’์„ ํ‰๊ท ๋‚ด๋ผ

๋ผ๋Š” ์šฉ๋„์ž…๋‹ˆ๋‹ค.



2️⃣ Parcellation (๊ตฌํšํ™”)

์ •์˜

Parcellation์€:

์ด๋ฏธ ๋ถ„๋ฆฌ๋œ ๋‡Œ๋ฅผ ํ•ด๋ถ€ํ•™์  ์˜์—ญ(atlas ๊ธฐ์ค€) ์œผ๋กœ ๋‚˜๋ˆ„๋Š” ๊ฒƒ

์ž…๋‹ˆ๋‹ค.


์งˆ๋ฌธ์˜ ์ดˆ์ 

๐Ÿ‘‰ ์ด ํ”ฝ์…€์ด ์–ด๋А ๋‡Œ์—ฝ์ธ๊ฐ€? ์–ด๋А ํ”ผ์งˆ์ธ๊ฐ€?


ํŠน์ง•

  • ํ•ญ์ƒ multi-label

  • Atlas ๊ธฐ๋ฐ˜

  • ์œ„์น˜ ์ค‘์‹ฌ

  • ์˜์—ญ ์ •์˜ ๋ชฉ์ 


์˜ˆ์‹œ

ROI
Frontal
Temporal
Parietal
Precuneus
Posterior Cingulate
Hippocampus

๊ฒฐ๊ณผ

๋ณดํ†ต:

aparc+aseg parcellation map atlas labels

PET ํŒŒ์ดํ”„๋ผ์ธ์—์„œ์˜ ์—ญํ• 

๐Ÿ‘‰ SUVr ๊ณ„์‚ฐ์šฉ ์˜์—ญ ์ •์˜

์˜ˆ:

Temporal cortex SUVr Precuneus SUVr


๐Ÿ”ฌ ํ•ต์‹ฌ ๊ตฌ์กฐ ๊ด€๊ณ„ (ADNI ์Šคํƒ€์ผ ๊ธฐ์ค€)

์‹ค์ œ ์—ฐ๊ตฌ ํ๋ฆ„์€ ํ•ญ์ƒ ๋‹ค์Œ ์ˆœ์„œ์ž…๋‹ˆ๋‹ค:

Segmentation → Parcellation → SUVr

๋” ์ •ํ™•ํžˆ:

Brain Segmentation ↓ Cortical Parcellation ↓ PET SUVr Extraction

MRI ๊ธฐ์ค€

  1. Segmentation:

๋‡Œ ์ถ”์ถœ Gray/White ๋ถ„๋ฆฌ
  1. Parcellation:

Gray matter๋ฅผ atlas๋กœ ๋‚˜๋ˆ”

๐Ÿ“ ๋น„์œ ๋กœ ์ดํ•ดํ•˜๊ธฐ

๋„์‹œ ๋น„์œ :


Segmentation

“์ด ๋•…์ด ๋„์‹œ์ธ๊ฐ€ ์•„๋‹Œ๊ฐ€?”


Parcellation

“์ด ๋„์‹œ๋Š” ๊ฐ•๋‚จ์ธ๊ฐ€, ์„œ์ดˆ์ธ๊ฐ€, ์†กํŒŒ์ธ๊ฐ€?”



3D Slicer ๊ด€์ 


Segmentation Module

๋ชฉ์ :

  • Mask ์ƒ์„ฑ

  • ROI ์ƒ์„ฑ


Parcellation Module / MONAI

๋ชฉ์ :

  • Atlas ๊ธฐ๋ฐ˜ label ์ƒ์„ฑ


์‹ค์ œ Slicer์—์„œ๋Š”:

๐Ÿ‘‰ Parcellation ๊ฒฐ๊ณผ๋„ Segmentation ํ˜•ํƒœ๋กœ ์ €์žฅ๋จ

๊ทธ๋ž˜์„œ ํ˜ผ๋™์ด ์ƒ๊น๋‹ˆ๋‹ค.


ํ•˜์ง€๋งŒ ๊ฐœ๋…์ ์œผ๋กœ:

๊ฒฐ๊ณผ ํ˜•ํƒœ์‹ค์ œ ์˜๋ฏธ
Segmentation๊ตฌ์กฐ ์ถ”์ถœ
Parcellation์˜์—ญ ์ •์˜

PET SUVr์—์„œ ์™œ ์ค‘์š”ํ•œ๊ฐ€?


Segmentation๋งŒ ์“ฐ๋ฉด?

→ ์ „์ฒด ๋‡Œ ํ‰๊ท ๋งŒ ๋‚˜์˜ด.


Parcellation๊นŒ์ง€ ํ•˜๋ฉด?

  • Temporal SUVr

  • Precuneus SUVr

  • Frontal SUVr

์ด๋ ‡๊ฒŒ ์˜๋ฏธ ์žˆ๋Š” ์ž„์ƒ ์ง€ํ‘œ ์ƒ์„ฑ ๊ฐ€๋Šฅ.


✅ ์ •๋ฆฌ

ํ•œ ๋ฌธ์žฅ ์š”์•ฝ:


Segmentation์€ ๊ตฌ์กฐ๋ฅผ ๋ถ„๋ฆฌํ•˜๋Š” ๊ธฐ์ˆ ์ด๊ณ ,
Parcellation์€ ๋ถ„๋ฆฌ๋œ ๊ตฌ์กฐ๋ฅผ ํ•ด๋ถ€ํ•™์  ์˜์—ญ์œผ๋กœ ๋‚˜๋ˆ„๋Š” ๊ธฐ์ˆ ์ด๋‹ค.


์กฐ๊ธˆ ๋” ์‹ค๋ฌด์ ์œผ๋กœ:

  • Segmentation = “๋งˆ์Šคํฌ ๋งŒ๋“ค๊ธฐ”

  • Parcellation = “ROI ์ง€๋„ ๋งŒ๋“ค๊ธฐ”

๋Œ“๊ธ€

์ด ๋ธ”๋กœ๊ทธ์˜ ์ธ๊ธฐ ๊ฒŒ์‹œ๋ฌผ

ํžˆ๋ธŒ๋ฆฌ์ธ, ์ด์Šค๋ผ์—˜์ธ, ์œ ๋Œ€์ธ ์„ฑ๊ฒฝ ์† ์ด๋ฆ„์— ์ˆจ๊ฒจ์ง„ ์†Œ๋ฆ„ ๋‹๋Š” ๋น„๋ฐ€

์ž‘์€ ํ‹ˆ์ด ๋ฌด๋„ˆ๋œจ๋ฆฐ๋‹ค ์™œ ์šฐ๋ฆฌ๋Š” ‘์‚ฌ์†Œํ•œ ๋ถ„์—ด’์„ ๊ทน๋„๋กœ ๊ฒฝ๊ณ„ํ•ด์•ผ ํ•˜๋Š”๊ฐ€

์ž‘์€ ํ‹ˆ์ด ๋ฌด๋„ˆ๋œจ๋ฆฐ๋‹ค ์™œ ์„ฑ๊ฒฝ์€ ‘๋ถ„์—ด์˜ ์‹œ์ž‘’์„ ๊ทธ๋ ‡๊ฒŒ ๊ฒฝ๊ณ ํ•˜๋Š”๊ฐ€